Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885146.1_cds_XP_016439123.1_34709
CDS Infomation

[gene=LOC107765045] [db_xref=GeneID:107765045] [protein=exosome complex exonuclease RRP44 homolog A-like] [protein_id=XP_016439123.1] [location=join(873..926,1045..1185,1283..1440,2404..2459,4598..4720,4935..5065,5167..5407,8079..8223,9533..9773,10039..10195,10333..10401,10832..10957,11111..11172,11777..11883,14910..14964,15076..15175,19270..19381,19874..19994,21699..21758,21847..21952,22041..22136,22812..22893,22971..23036,23145..23340)] [gbkey=CDS]
Sequence

ATGCTGAAGAGCAAAGCATTCACACGCCAAACAAGACAAGGCAGAATACTGAAGGAAGTT
AGGGAACACTATTTACGAGACGATATTTACTGCGGAGCTCCATTTTGCGACAAAGGTTGT
GACAAGTCATCTGCCCGCTTAAGCGCCTCTCCCTCCACTATTCTTGTTCTTGACACCAAC
GTTGTTCTCAACCAGATTGATTTGCTGGAGAATCCCGCTATTGACAATGTGGTAGTGTTA
TCCGTGGTATTGGCGGAGGTCAAGAACAAGGATATTGCCGTTTATAACAGACTCAGGGCT
CTTTGTAGCAATTCTTTAAGGAACTTCTTTGTCTTTTCTAATGAATATCACAAGGATACT
TATGTGGAGGCCATGGCTGGTGAAAGCCCGAATGATCGGAATGATAGAGCTATTAGGGTC
GCAGCTAAATGGTATCATGATCATCTTGGAAGCGCAGTAAGTGTCTTGCTAATTACGAAT
GATAGAGAAAACAAGAAGAAGGCAATTGATGAGGGTATTTCTGCAGAGACAGTTGAGTGT
TATGTAAAGTCGCTTGGTCAGGCGGAATTGCTTGACCTAATAGTTCAGCCTCCTTCTGAA
GAAGTTAATATGGAGGATGTTGAGGATTTGAGGCCTTCAAAGCGAAAAGTCATTTACAAC
GAGCATAAACCCATGTCAGAAATTACTTCGGGTTTGCTTCGAGGACTTTTCCACCAGGGG
AAACTTCGTGTTAACCGTTTTAATCCATTTGAAGCATATGTTGGTAGTGAAAGCATCGGT
GATGAGATAATTATATACGGGCGTGCAAATATGAATAGGGCTTTTGATGGTGATATAGTG
GCGGTTGAGCTTTTGCCTCAAGAACAGTGGCAGGAGGAGAAGTCTTTGGCATTAGCTGAT
GAAGATGAAGAAGAAGATGTTCATTTAGCTCCAAATAGCGCTGATGATGCTCCTAGAGTT
TTGAATCAAGGGCAAACTGCATCCGAGGAAATGAAACCTTCTCGCCCAACTGGACGTGTT
GTTGGGATCATAAAGCGGAACTGGCACTCTTACTGTGGATCCTTGGAGCCAATGCCTATG
CCAGGAGGTAATGGTGGTCTTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATCCCT
AAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATCGTTGCG
GTTGATTCATGGGATCGTTTGTCCCGATATCCAACCGGTCACTATGTCAGGACAATTGGA
GAAATAGGTGACAGGGATACTGAAACAGAGGTGGTATTAATAGAGAATGATATAGATGCC
AGACCATTTTCTGTTCAAGTGTTGGCATGCTTGCCACCGTTACCTTGGTCTGTGTCTTCT
CAAGATTTGACAAATCCTATTAGACAGGATTTGCGTCATCTGCGTGTATGTAGTGTGGAC
CCTCCTGGATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTCCAAATGGAAAT
TTTGAAGTGGGAGTTCATATAGCTGATGTTACTAATTTTGTTCATCCTGGAACTCCACTC
GATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTCGTAGAGCGTCGAATCGACATG
CTTCCAAAACCTCTTACAGAAGATATTTGTTCACTTCGTGCTGATGTTGAAAGACTAGCT
TTCTCAGTNTATCTGTTTCTCTATGAAATGACACCTGATGCTGAGATTATTTCTACTAGA
TACACTAAAAGCGTGATTAAATCTTGTGCAGCATTATCCTATGTCGAGGCTCAAGCGAGA
ATGGATGACAGTCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTA
GCCAAGATTATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCAGCTGAA
GTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTGGGATGTATCAGATT
CGTGAAGCAAACCAAATGGTTGAGGAGTTTATGCTTGCTGCTAATGTTGCAGTTGCTGAA
AAAATCCTGAAGCATTTTCCTCTCTGCTCTCTGCTAAGACGCCATCCTAGCCCAACCAAA
GAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACA
TCATCCAAAGCATTGGCTGACTCTCTGGATCGGGCCGTGGGTGATGATCCATACTTCAAC
AAGCTGATTCGGATTCTGACAACCAGATGCATGACACAGGCGGTTTACTTCTGTAGTGGA
GACCTTAGTCCTCCGGAATATCTTCATTATGGTCTTGCCTCTCAACTTTATACTCATTTC
ACCTCGCCCATTAGAAGATATGCTGATGTAATCGTTCATCGGTTGCTTGCTGCATCTTTG
GGGATATATAAGCTTCCTGGTGTTTTCCAAGATAGACCCAAGCTAACTAGTATTTCTGAC
AATCTAAATTATCGGCATAGGAATGCTCAGATGGCCAGCAGAGCATCAGTGGAGCTCCAT
ACCCTCATTTTCTTCAGGAAGCGGCCGACAGATGCTGAGGCGAGAATTGTGAAAATAAGA
TCGAATGGCTTCATTGTCTTTGTGCCCAAGTATGGTATTGAAGGGCCTGTTTACTTGACA
TCAAAAGGCGAAAATGCAGGGGAATGGTTAGCCGATGAGAAACAACAGAGAATACGAAAG
GTTGATGGGAGTGTCTCTTATGGTGTGCTTGGAACAGTGAGGATTCACATGGAGGTTGTT
GAGCCTCAGCCTAATCGGCCTAAACTCCAACTTACCCTTGTATGA

Peptide Sequence

PEP ID

XP_016439123.1
PEP Infomation

PREDICTED: exosome complex exonuclease RRP44 homolog A-like [Nicotiana tabacum]
Sequence

MLKSKAFTRQTRQGRILKEVREHYLRDDIYCGAPFCDKGCDKSSARLSASPSTILVLDTN
VVLNQIDLLENPAIDNVVVLSVVLAEVKNKDIAVYNRLRALCSNSLRNFFVFSNEYHKDT
YVEAMAGESPNDRNDRAIRVAAKWYHDHLGSAVSVLLITNDRENKKKAIDEGISAETVEC
YVKSLGQAELLDLIVQPPSEEVNMEDVEDLRPSKRKVIYNEHKPMSEITSGLLRGLFHQG
KLRVNRFNPFEAYVGSESIGDEIIIYGRANMNRAFDGDIVAVELLPQEQWQEEKSLALAD
EDEEEDVHLAPNSADDAPRVLNQGQTASEEMKPSRPTGRVVGIIKRNWHSYCGSLEPMPM
PGGNGGLAHALFVSKDRRIPKIRIQTRQLGNLLDKRIIVAVDSWDRLSRYPTGHYVRTIG
EIGDRDTETEVVLIENDIDARPFSVQVLACLPPLPWSVSSQDLTNPIRQDLRHLRVCSVD
PPGCRDIDDALHCMPLPNGNFEVGVHIADVTNFVHPGTPLDDEASQRGTSVYLVERRIDM
LPKPLTEDICSLRADVERLAFSVYLFLYEMTPDAEIISTRYTKSVIKSCAALSYVEAQAR
MDDSRLVDPITSDLRNLNGLAKIMRQRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQI
REANQMVEEFMLAANVAVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTAEAVGLSLDVT
SSKALADSLDRAVGDDPYFNKLIRILTTRCMTQAVYFCSGDLSPPEYLHYGLASQLYTHF
TSPIRRYADVIVHRLLAASLGIYKLPGVFQDRPKLTSISDNLNYRHRNAQMASRASVELH
TLIFFRKRPTDAEARIVKIRSNGFIVFVPKYGIEGPVYLTSKGENAGEWLADEKQQRIRK
VDGSVSYGVLGTVRIHMEVVEPQPNRPKLQLTLV

Transcript Sequence

Gene sequence data has not been registered.